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Human Y-chromosome DNA haplogroup Wiki2Web Clarity Challenge

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Study Guide: Y-DNA Haplogroups: Phylogeny and Distribution

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Y-DNA Haplogroups: Phylogeny and Distribution Study Guide

Foundational Concepts of Y-DNA

Y-chromosomal Adam, the most recent common ancestor for all living humans' paternal lineages, is estimated to have lived approximately 236,000 years ago in Africa.

Answer: True

Explanation: Y-chromosomal Adam represents the most recent common ancestor for all living humans' paternal lineages, with an estimated origin in Africa approximately 236,000 years ago.

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The Y-chromosome accumulates approximately one mutation per generation, which is crucial for dating haplogroup origins.

Answer: False

Explanation: The Y-chromosome accumulates approximately two mutations per generation, a rate crucial for dating haplogroup origins.

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The term 'NRY' refers to the recombining region of the Y chromosome, which is passed down from mother to child.

Answer: False

Explanation: The term 'NRY' refers to the non-recombining region of the Y chromosome, which is passed down exclusively from father to son.

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What defines a human Y-chromosome DNA haplogroup?

Answer: Specific mutations, known as SNPs, in the non-recombining portions of the Y chromosome.

Explanation: Human Y-chromosome DNA haplogroups are defined by specific mutations, known as Single Nucleotide Polymorphisms (SNPs), located in the non-recombining portions of the Y chromosome.

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Which individual is known as the most recent ancestor from whom all living humans can trace their paternal lineage?

Answer: Y-chromosomal Adam

Explanation: Y-chromosomal Adam is recognized as the most recent common ancestor from whom all living humans can trace their paternal lineage.

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What is the significance of the non-recombining region of the Y chromosome (NRY)?

Answer: It is passed down exclusively from father to son without recombination, preserving mutation history.

Explanation: The non-recombining region of the Y chromosome (NRY) is significant because it is passed down exclusively from father to son without recombination, thus preserving the history of mutations.

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Y-DNA Nomenclature and Phylogeny

The Y Chromosome Consortium (YCC) uses a naming system for major Y-DNA haplogroups that exclusively employs numbers and lowercase letters.

Answer: False

Explanation: The Y Chromosome Consortium (YCC) employs a naming system for major Y-DNA haplogroups using capital letters (A through T), with subsequent subclades designated by numbers and lowercase letters.

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A 'terminal SNP' is the earliest mutation defining a major haplogroup branch on the Y-chromosome phylogenetic tree.

Answer: False

Explanation: A 'terminal SNP' is the most recent mutation defining a specific branch or subclade on the Y-chromosome phylogenetic tree, not the earliest.

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Y-DNA haplogroup nomenclature changes are driven by the discovery of new STR patterns, not new SNPs.

Answer: False

Explanation: Y-DNA haplogroup nomenclature changes are primarily driven by the discovery of new Single Nucleotide Polymorphisms (SNPs), which refine the phylogenetic tree, rather than new STR patterns.

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According to the source, what does 'kya' stand for in the context of Y-DNA phylogeny?

Answer: Thousand years ago

Explanation: In the context of Y-DNA phylogeny, 'kya' is an abbreviation for 'thousand years ago', used to denote estimated ages of haplogroups or mutations.

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How does the Y Chromosome Consortium (YCC) typically designate major Y-DNA haplogroups?

Answer: Using capital letters from A through T.

Explanation: The Y Chromosome Consortium (YCC) typically designates major Y-DNA haplogroups using capital letters, starting from A and progressing through the alphabet.

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Why does Y-DNA haplogroup nomenclature undergo changes over time?

Answer: To reflect the discovery of new SNPs and refine the phylogenetic tree.

Explanation: Y-DNA haplogroup nomenclature changes over time primarily to incorporate the discovery of new Single Nucleotide Polymorphisms (SNPs), which allows for a more refined and accurate phylogenetic tree.

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What does the image caption 'Human Y-DNA phylogeny and haplogroup distribution' indicate about the term 'kya'?

Answer: It signifies 'thousand years ago' in the phylogenetic tree.

Explanation: The caption indicates that 'kya' signifies 'thousand years ago' within the context of the human Y-DNA phylogenetic tree.

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Early Human Migrations and Macrohaplogroups

Haplogroup CT, which includes all haplogroups except A and B, originated outside of Africa approximately 150,000 years ago.

Answer: False

Explanation: Haplogroup CT, a major lineage encompassing most non-African haplogroups, is estimated to have originated within Africa approximately 88,000 to 100,000 years ago, not outside Africa.

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The widespread distribution of Haplogroup F (M89) across approximately 90% of the world's population outside sub-Saharan Africa suggests it was carried by early human migrations out of Africa.

Answer: True

Explanation: The broad distribution of Haplogroup F (M89) outside sub-Saharan Africa, encompassing roughly 90% of the global population, strongly indicates its association with early human migrations originating from Africa.

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The broad distribution of Haplogroup F (M89) outside of sub-Saharan Africa suggests its association with:

Answer: Early human migrations out of Africa.

Explanation: The broad distribution of Haplogroup F (M89) outside sub-Saharan Africa suggests its strong association with early human migrations out of Africa.

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What is the estimated origin time for Haplogroup CT?

Answer: Around 88,000 to 100,000 years ago

Explanation: The estimated origin time for Haplogroup CT is around 88,000 to 100,000 years ago.

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African Haplogroups

Haplogroup A is the foundational macrohaplogroup from which all modern paternal haplogroups ultimately descend and is primarily found in Europe.

Answer: False

Explanation: Haplogroup A is indeed the foundational macrohaplogroup, but it is primarily found in Africa, not Europe.

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Haplogroup E (M96) is predominantly found in Africa and the Middle East, with major subclades including E1a and E1b1b.

Answer: True

Explanation: Haplogroup E (M96) is predominantly found in Africa and the Middle East, featuring major subclades such as E1a and E1b1b.

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Haplogroup BT, a subclade of Haplogroup A, is estimated to have originated approximately 130,700 years ago in Africa.

Answer: True

Explanation: Haplogroup BT, a subclade of Haplogroup A, is estimated to have originated in Africa approximately 130,700 years ago.

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Haplogroup E1b1b-M35 is significant due to its presence in North Africa, the Middle East, and Europe, and is estimated to have originated in West Africa.

Answer: False

Explanation: Haplogroup E1b1b-M35 is significant for its presence in North Africa, the Middle East, and Europe, but it is estimated to have originated in East Africa, not West Africa.

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Haplogroup A, the foundational macrohaplogroup, is found with concentrations among which populations?

Answer: Khoisan populations in the southwest and Nilotic populations in the northeast

Explanation: Haplogroup A, the foundational macrohaplogroup, is found with concentrations among the Khoisan populations in southwestern Africa and Nilotic populations in northeastern Africa.

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Which major subclade of Haplogroup E is widely found among Niger-Congo speakers?

Answer: E1b1a

Explanation: Haplogroup E1b1a is a major subclade of Haplogroup E that is widely found among Niger-Congo language speakers.

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West Asian and European Haplogroups

Haplogroup G (M201) originated in Europe around 48,000 years ago and spread into Asia with the Neolithic Revolution.

Answer: False

Explanation: Haplogroup G (M201) is estimated to have originated in the Middle East around 48,000 years ago and subsequently spread into Europe and Asia.

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Haplogroup I (M170) is mainly found in Europe and the Caucasus, with I1 common in Northern Europe and I2 prevalent in the Balkans.

Answer: True

Explanation: Haplogroup I (M170) is predominantly found in Europe and the Caucasus, with Haplogroup I1 being common in Northern Europe and Haplogroup I2 prevalent in the Balkans.

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Haplogroup J (M304) is primarily found in East Asia and Sub-Saharan Africa.

Answer: False

Explanation: Haplogroup J (M304) is primarily found in the Middle East, the Caucasus, and Southeast Europe, not East Asia and Sub-Saharan Africa.

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Haplogroup R1b is dominant in Eastern Europe and associated with Germanic peoples.

Answer: False

Explanation: Haplogroup R1b is dominant in Western Europe and associated with Italo-Celtic and Germanic peoples, not Eastern Europe.

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Haplogroup R1b-M269 is the most common haplogroup among modern Western European populations.

Answer: True

Explanation: Haplogroup R1b-M269 is recognized as the most common haplogroup among modern Western European populations.

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Haplogroup G (M201) is commonly found in regions including the Caucasus, Iran, and various parts of Europe, particularly around the Mediterranean. Where did it likely originate?

Answer: The Middle East

Explanation: Haplogroup G (M201) is commonly found in the Caucasus, Iran, and Europe, but it likely originated in the Middle East.

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Which of the following is a primary European subclade of Haplogroup I (M170)?

Answer: I1

Explanation: Haplogroup I1 is a primary European subclade of Haplogroup I (M170), commonly found in Northern Europe.

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According to the source, Haplogroup J1 is associated with which linguistic or ethnic groups?

Answer: Northeast Caucasian and Semitic-speaking peoples

Explanation: Haplogroup J1 is associated with Northeast Caucasian and Semitic-speaking peoples.

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Haplogroup T is noted for its prevalence in which geographical areas?

Answer: The Horn of Africa, the Middle East, and the Mediterranean

Explanation: Haplogroup T is noted for its prevalence in the Horn of Africa, the Middle East, and the Mediterranean region.

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Which haplogroup is dominant in Western Europe and associated with Italo-Celtic and Germanic peoples?

Answer: Haplogroup R1b

Explanation: Haplogroup R1b is dominant in Western Europe and associated with Italo-Celtic and Germanic peoples.

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Haplogroup E1b1b-V13 is estimated to have originated in which region?

Answer: Southern Europe

Explanation: Haplogroup E1b1b-V13 is estimated to have originated in Southern Europe.

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Haplogroup J2 is commonly found among which groups?

Answer: Semitic peoples, Anatolians, Greeks, and Balkan populations

Explanation: Haplogroup J2 is commonly found among Semitic peoples, Anatolians, Greeks, and Balkan populations.

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Asian, Oceanian, and American Haplogroups

Haplogroup C (M130) is predominantly found across Asia, Oceania, and North America.

Answer: True

Explanation: Haplogroup C, defined by the M130 mutation, exhibits a predominant distribution across Asia, Oceania, and North America.

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Haplogroup D (CTS3946) is mainly distributed in Africa and the Middle East.

Answer: False

Explanation: Haplogroup D (CTS3946) is primarily distributed in East Asia, notably Japan, Tibet, and the Andaman Islands, not Africa and the Middle East.

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Haplogroup H (M69) is primarily found in Northern Europe and is associated with the migration of the Roma people.

Answer: False

Explanation: Haplogroup H (M69) is primarily found in South Asia, Central Asia, and West Asia, and its subclade H1a1 is associated with the migration of the Roma people.

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Haplogroup K (M9) is widespread across Eurasia, Oceania, and among Native Americans, with the K* paragroup mainly found in Melanesia and Aboriginal Australia.

Answer: True

Explanation: Haplogroup K (M9) is indeed widespread across Eurasia, Oceania, and among Native Americans, with the K* paragroup predominantly found in Melanesia and among Aboriginal Australians.

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Haplogroup L is found predominantly in Northern Europe, while Haplogroup T is prevalent in South America.

Answer: False

Explanation: Haplogroup L is found predominantly in South Asia and Central Asia, while Haplogroup T is prevalent in the Horn of Africa, the Middle East, and the Mediterranean region.

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The basal paragroup K2* is primarily identified among indigenous populations of Siberia.

Answer: False

Explanation: The basal paragroup K2* is primarily identified among indigenous populations of Australia and Melanesia, not Siberia.

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Haplogroup N (M231) is primarily found in Northern Eurasia, particularly among speakers of Uralic languages.

Answer: True

Explanation: Haplogroup N (M231) is primarily found in Northern Eurasia, with a notable concentration among speakers of Uralic languages.

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Haplogroup O (M175) is most common in Africa and the Middle East.

Answer: False

Explanation: Haplogroup O (M175) is most common in East Asia and Southeast Asia, not Africa and the Middle East.

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Haplogroup P (P295) has two main branches: P1 (P-M45) and P2 (P-B253), with P* and P1* found together in the Philippines.

Answer: True

Explanation: Haplogroup P (P295) has two main branches, P1 (P-M45) and P2 (P-B253), and its paragroups P* and P1* are found in the Philippines.

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Haplogroup Q (M242) is estimated to have arisen in Europe around 32,000 years ago and is found in Siberia and the Americas.

Answer: False

Explanation: Haplogroup Q (M242) is estimated to have arisen in Central Asia around 32,000 years ago and is found in Siberia and the Americas.

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Haplogroup R1a is associated with Proto-Indo-Iranian and Balto-Slavic peoples and is found in Central Asia, South Asia, and Eastern Europe.

Answer: True

Explanation: Haplogroup R1a is associated with Proto-Indo-Iranian and Balto-Slavic peoples and is predominantly found in Central Asia, South Asia, and Eastern Europe.

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Haplogroup Q1a3a (M3) is typically found among the indigenous peoples of the Americas.

Answer: True

Explanation: Haplogroup Q1a3a (M3) is indeed typically found among the indigenous peoples of the Americas.

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Which haplogroup is defined by the M130 mutation and found across Asia, Oceania, and North America?

Answer: Haplogroup C

Explanation: Haplogroup C is defined by the M130 mutation and is found across Asia, Oceania, and North America.

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Haplogroup D (CTS3946) shows a primary distribution in which regions?

Answer: Japan, China (Tibet), and the Andaman Islands

Explanation: Haplogroup D (CTS3946) shows a primary distribution in Japan, China (particularly Tibet), and the Andaman Islands.

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The H1a1 subclade of Haplogroup H is noted for spreading westward with the migration of which group?

Answer: The Roma people

Explanation: The H1a1 subclade of Haplogroup H is noted for spreading westward with the migration of the Roma people.

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The paragroup K* (K-M9 excluding LT and K2 subclades) is primarily found in which regions?

Answer: Melanesia, Aboriginal Australians, India, Polynesia, and Island Southeast Asia

Explanation: The paragroup K* is primarily found in Melanesia, among Aboriginal Australians, India, Polynesia, and Island Southeast Asia.

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Which haplogroup is found in Northern Eurasia, particularly among speakers of Uralic languages, and possibly originated in East Asia?

Answer: Haplogroup N

Explanation: Haplogroup N is found in Northern Eurasia, particularly among speakers of Uralic languages, and possibly originated in East Asia.

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Haplogroup O (M175) is most frequently found in which part of the world?

Answer: East Asia and Southeast Asia

Explanation: Haplogroup O (M175) is most frequently found in East Asia and Southeast Asia.

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Haplogroup Q, estimated to have arisen in Central Asia around 32,000 years ago, is predominantly found in which regions?

Answer: Siberia and the Americas

Explanation: Haplogroup Q, estimated to have arisen in Central Asia around 32,000 years ago, is predominantly found in Siberia and the Americas.

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Which haplogroup is defined by M207 and is ancestral to R1?

Answer: Haplogroup R

Explanation: Haplogroup R, defined by M207, is ancestral to Haplogroup R1.

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Which haplogroup is defined by M231 and is found in Northern Eurasia?

Answer: Haplogroup N

Explanation: Haplogroup N is defined by M231 and is found in Northern Eurasia.

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Which haplogroup is defined by M9 and is widespread across Eurasia, Oceania, and among Native Americans?

Answer: Haplogroup K

Explanation: Haplogroup K is defined by M9 and is widespread across Eurasia, Oceania, and among Native Americans.

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Haplogroup Timelines and Origins

The TMRCA for Haplogroup I1 (M253) is estimated to be around 4,600 years ago.

Answer: True

Explanation: The Time to Most Recent Common Ancestor (TMRCA) for Haplogroup I1 (M253) is estimated to be approximately 4,600 years ago.

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What is the estimated TMRCA (Time to Most Recent Common Ancestor) for Haplogroup R1a-M458?

Answer: Approximately 4,700 years ago

Explanation: The estimated TMRCA for Haplogroup R1a-M458 is approximately 4,700 years ago.

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Haplogroup R1b-L151 is estimated to have originated in Eastern Europe approximately how many years ago?

Answer: 5,800 years ago

Explanation: Haplogroup R1b-L151 is estimated to have originated in Eastern Europe approximately 5,800 years ago.

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