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Study Guide: Fundamentals of Virology

Cheat Sheet:
Fundamentals of Virology Study Guide

Introduction to Viruses

Viruses possess the capability for independent reproduction outside of living host cells.

Answer: False

Explanation: Viruses are obligate intracellular parasites and require the metabolic machinery of living host cells for replication; they cannot reproduce independently.

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Viruses are restricted to infecting only animals and plants, excluding microorganisms.

Answer: False

Explanation: Viruses infect all known forms of life, including microorganisms such as bacteria and archaea, in addition to animals and plants.

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When external to a host cell, a virion comprises genetic material (DNA or RNA) enclosed by a protein coat termed a capsid, and occasionally a lipid envelope.

Answer: True

Explanation: The virion, the complete infectious viral particle outside a host cell, consists of genetic material (DNA or RNA) encased in a protein capsid, and sometimes an outer lipid envelope.

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The typical size of most viruses exceeds that of most bacteria.

Answer: False

Explanation: Most viruses are significantly smaller than bacteria; virions are frequently approximately one-hundredth the size of most bacterial cells.

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Viral genomes consist exclusively of double-stranded DNA.

Answer: False

Explanation: Viral genomes can be composed of DNA or RNA, which can be single- or double-stranded.

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DNA viruses typically replicate their genomes within the host cell's cytoplasm.

Answer: False

Explanation: DNA viruses generally replicate in the host cell nucleus, whereas RNA viruses typically replicate in the cytoplasm.

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All viruses are characterized by an outer lipid envelope derived from the host cell membrane.

Answer: False

Explanation: While some viruses possess a lipid envelope derived from the host cell membrane, not all viruses have this structure; many are non-enveloped.

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Based on the provided definition, what is the fundamental characteristic of a virus's replication process?

Answer: They require the living cells of an organism to multiply.

Explanation: Viruses are obligate intracellular parasites, meaning they must infect a living host cell and utilize its machinery to replicate.

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Which of the following life forms are NOT infected by viruses, according to the source?

Answer: Viruses infect all known forms of life, including plants, archaea, and bacteria.

Explanation: The provided information indicates that viruses infect all known forms of life, encompassing plants, animals, fungi, bacteria, and archaea.

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What term describes the complete viral particle when it is outside of a host cell?

Answer: Virion

Explanation: The complete, infectious viral particle outside of a host cell is termed a virion.

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How does the typical size of most viruses compare to that of a bacterium?

Answer: Most viruses are significantly smaller than most bacteria.

Explanation: Viruses are typically much smaller than bacteria, often by a factor of 100 or more.

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Which type of nucleic acid is NOT found in viral genomes according to the source?

Answer: Triple-stranded DNA

Explanation: Viral genomes can be DNA or RNA, single or double-stranded, but triple-stranded DNA is not a recognized viral genome type.

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How do DNA viruses typically differ from RNA viruses in their replication strategy?

Answer: DNA viruses replicate in the nucleus; RNA viruses usually replicate in the cytoplasm.

Explanation: DNA viruses typically replicate in the host cell nucleus, while RNA viruses generally replicate in the cytoplasm.

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History and Discovery of Virology

Dmitri Ivanovsky is credited with the initial description of viruses in 1892, based on experiments involving the filtration of infectious tobacco plant sap.

Answer: True

Explanation: Dmitri Ivanovsky's 1892 work demonstrated that the infectious agent from diseased tobacco plants could pass through filters designed to retain bacteria, marking an early step in identifying viruses.

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Virology constitutes the scientific discipline dedicated to the study of viruses.

Answer: True

Explanation: Virology is the branch of science specifically focused on the study of viruses.

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The Latin word 'virus' originally signified 'vaccine'.

Answer: False

Explanation: The Latin word 'virus' originally meant 'poison' or 'noxious liquid', reflecting early perceptions of disease-causing agents.

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Bacteriophages were discovered independently by Frederick Twort and Félix d'Hérelle, a development that significantly advanced the field of virology.

Answer: True

Explanation: The independent discoveries of bacteriophages by Twort and d'Hérelle were pivotal moments that spurred the growth and understanding of virology.

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The term 'virus' originates from the Greek word signifying 'microbe'.

Answer: False

Explanation: The term 'virus' is derived from the Latin word 'virus,' meaning 'poison'.

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When was the existence of viruses first described, and by whom?

Answer: Dmitri Ivanovsky, 1892

Explanation: Dmitri Ivanovsky first described the existence of viruses in 1892 through his work with tobacco mosaic disease.

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What is the name of the scientific discipline focused on the study of viruses?

Answer: Virology

Explanation: The scientific study of viruses is known as virology.

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The word 'virus' is derived from a Latin term that originally meant:

Answer: Poison

Explanation: The Latin word 'virus' originally meant 'poison' or 'noxious liquid'.

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Viral Classification and Diversity

Viruses are typically classified into five principal morphological types: helical, icosahedral, prolate, enveloped, and complex.

Answer: True

Explanation: Morphological classification of viruses commonly includes helical, icosahedral, prolate, enveloped, and complex structures.

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Giant viruses, such as Mimivirus, are characterized by their small size and simple genomes.

Answer: False

Explanation: Giant viruses, exemplified by Mimivirus, are distinguished by their exceptionally large size and substantial genomes, contrary to being small and simple.

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The Baltimore classification system groups viruses according to their size and shape.

Answer: False

Explanation: The Baltimore classification system categorizes viruses based on their genome type and their method of mRNA production, not size and shape.

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Bacteriophages are viruses that infect bacteria and exhibit maximal abundance in terrestrial soil environments.

Answer: False

Explanation: Bacteriophages are most abundant in aquatic environments, not terrestrial soil.

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Bacteria are devoid of defense mechanisms against bacteriophages.

Answer: False

Explanation: Bacteria possess sophisticated defense mechanisms against bacteriophages, including restriction-modification systems and CRISPR-Cas systems.

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The International Committee on Taxonomy of Viruses (ICTV) is responsible for classifying viruses according to their symptoms.

Answer: False

Explanation: The ICTV classifies viruses based on shared properties and genetic relationships, not primarily on symptoms.

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Giant viruses, such as Mimivirus, are exclusively observable through advanced electron microscopy.

Answer: False

Explanation: While many viruses require electron microscopy, some giant viruses, like Mimivirus, are large enough to be visible under a basic optical microscope.

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Bacteriophages are principally recognized for their infection of plant cells.

Answer: False

Explanation: Bacteriophages are viruses that specifically infect bacteria, not plant cells.

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The Baltimore classification system categorizes viruses into seven distinct groups predicated on their genome and mRNA production strategy.

Answer: True

Explanation: The Baltimore classification system is based on the nature of the viral genome and its replication pathway concerning mRNA synthesis, resulting in seven distinct groups.

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Which of the following are NOT among the five main morphological types of viruses mentioned?

Answer: Bacterial

Explanation: The five main morphological types are helical, icosahedral, prolate, enveloped, and complex. 'Bacterial' is not a morphological type of virus.

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What distinguishes 'giant viruses' from most other viruses?

Answer: Their exceptionally large size and substantial genomes.

Explanation: Giant viruses are characterized by their unusually large physical dimensions and extensive genomes compared to typical viruses.

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The Baltimore classification system groups viruses based on:

Answer: Their genome composition and mRNA production method.

Explanation: The Baltimore classification system categorizes viruses into seven groups based on their genome type (DNA/RNA, single/double-stranded) and how they generate mRNA.

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Where are bacteriophages found to be most abundant?

Answer: In aquatic environments

Explanation: Bacteriophages are exceptionally abundant, particularly in aquatic environments, where they are considered the most numerous biological entities.

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Which of the following is a defense mechanism bacteria use against bacteriophages?

Answer: Utilizing CRISPR-Cas systems.

Explanation: CRISPR-Cas systems provide bacteria with adaptive immunity against phages by targeting and degrading previously encountered viral genetic material.

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What is the primary role of the International Committee on Taxonomy of Viruses (ICTV)?

Answer: To establish and maintain a unified system for classifying viruses.

Explanation: The ICTV is responsible for developing and maintaining a standardized, hierarchical system for the classification and naming of viruses.

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Which of the following viral groups in the Baltimore classification system uses a single-stranded RNA genome with a positive sense (+ssRNA)?

Answer: Group IV ((+)ssRNA)

Explanation: Group IV viruses in the Baltimore classification system possess a positive-sense single-stranded RNA genome.

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Viral Evolution and Origins

The regressive hypothesis posits that viruses evolved from complex molecules that underwent co-evolution with cellular entities.

Answer: False

Explanation: The regressive hypothesis suggests viruses evolved from more complex, free-living organisms that subsequently lost genetic material. The hypothesis involving co-evolution with cells from complex molecules is termed the co-evolution hypothesis.

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The determination of viral evolutionary origins is straightforward owing to the abundance of fossilized viral evidence.

Answer: False

Explanation: The evolutionary origin of viruses is challenging to determine definitively because viruses do not fossilize; scientists rely on molecular techniques and indirect evidence.

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The 'virocell' model proposes that individual virions represent the living form of a virus.

Answer: False

Explanation: The virocell model suggests that the infected host cell itself can be considered the 'living form' of the virus, with virions analogous to spores.

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Viruses predominantly impede evolution through the reduction of genetic diversity.

Answer: False

Explanation: Viruses contribute to evolution by facilitating horizontal gene transfer, thereby increasing genetic diversity and driving evolutionary change.

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Which hypothesis suggests viruses originated from genetic elements like plasmids that escaped from cells?

Answer: The cellular origin hypothesis

Explanation: The cellular origin hypothesis posits that viruses arose from mobile genetic elements that escaped from cellular genomes.

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Why is studying the evolutionary origin of viruses particularly challenging?

Answer: Viruses do not leave fossil records.

Explanation: The absence of fossilized viral evidence makes reconstructing their evolutionary history particularly difficult.

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How do viruses contribute significantly to evolution?

Answer: By acting as agents of horizontal gene transfer between species.

Explanation: Viruses facilitate horizontal gene transfer, introducing genetic variation that drives evolutionary adaptation and change across species.

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Viral Life Cycles and Pathogenesis

Influenza and rabies exemplify common human diseases caused by viruses.

Answer: True

Explanation: Influenza and rabies are indeed well-known examples of human diseases caused by viral pathogens.

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Viral latency denotes a state wherein a virus actively causes severe symptoms immediately upon infection.

Answer: False

Explanation: Viral latency is characterized by a period of inactivity or dormancy within the host cell, often without causing immediate symptoms.

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Airborne transmission, facilitated by coughing and sneezing, is a common route for viral spread between hosts.

Answer: True

Explanation: Respiratory droplets expelled during coughing and sneezing are a primary mechanism for the airborne transmission of many viruses.

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An epidemic is a viral outbreak that has spread globally, whereas a pandemic is confined to a specific region.

Answer: False

Explanation: A pandemic is defined as a global outbreak, while an epidemic is typically confined to a specific region or population.

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Certain viruses contribute to cancer development through the disruption of cell cycle regulation.

Answer: True

Explanation: Oncogenic viruses can induce cancer by interfering with cellular mechanisms that control cell growth and division, such as cell cycle regulation.

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HIV evades the immune system primarily through extremely slow replication.

Answer: False

Explanation: HIV evades the immune system through multiple strategies, including rapid mutation of surface proteins, rather than solely through slow replication.

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Human papillomavirus (HPV) and Hepatitis B virus (HBV) are examples of viruses associated with cancer development.

Answer: True

Explanation: Certain strains of HPV and HBV are recognized oncogenic viruses linked to the development of various cancers.

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Antigenic shift involves minor, gradual alterations in influenza virus surface proteins resulting from point mutations.

Answer: False

Explanation: Antigenic shift refers to major changes due to genetic reassortment, while minor gradual changes from point mutations are termed antigenic drift.

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Herpesviruses establish latency through the active destruction of host cells immediately upon infection.

Answer: False

Explanation: Herpesviruses establish latency by remaining dormant and inactive within host cells, not by actively destroying them upon initial infection.

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Cytopathic effects are advantageous changes induced by viruses that augment host cell function.

Answer: False

Explanation: Cytopathic effects are detrimental structural and biochemical changes viruses induce in host cells, often leading to cell damage or death.

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Which of these is an example of a common human disease caused by a virus?

Answer: Common cold

Explanation: The common cold is a prevalent human illness caused by various viruses, primarily rhinoviruses.

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What does 'viral latency' refer to?

Answer: A state where the virus is inactive and dormant within a cell.

Explanation: Viral latency describes a phase where the virus exists in a dormant state within the host cell, typically without causing active disease symptoms.

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Which pathway is mentioned as a common route for virus transmission?

Answer: Ingestion of contaminated food or water

Explanation: The fecal-oral route, which includes ingestion of contaminated food or water, is a common transmission pathway for many viruses.

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What is the key difference between an epidemic and a pandemic?

Answer: A pandemic is a global outbreak, while an epidemic is regional.

Explanation: A pandemic signifies a widespread epidemic that has crossed international boundaries, affecting a global population, whereas an epidemic is typically localized.

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How can certain viruses contribute to the development of cancer?

Answer: By producing proteins that disrupt cell cycle regulation.

Explanation: Oncogenic viruses can produce proteins that interfere with the host cell's normal regulation of the cell cycle, leading to uncontrolled proliferation.

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HIV evades the host's immune system through which strategy?

Answer: Constant mutation of surface proteins to avoid recognition.

Explanation: HIV frequently mutates its surface proteins, allowing it to evade recognition and destruction by the host immune system.

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Which viruses are mentioned as established causes of human cancers?

Answer: Hepatitis B virus (HBV) and Human Papillomavirus (HPV)

Explanation: Hepatitis B virus (HBV) and certain types of Human Papillomavirus (HPV) are recognized as established causes of human cancers.

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What is antigenic drift in influenza viruses?

Answer: The gradual accumulation of point mutations in the genome.

Explanation: Antigenic drift refers to the minor, gradual changes in viral surface proteins caused by point mutations, leading to new variants.

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How do viruses like herpesviruses establish persistent infections?

Answer: By remaining dormant and inactive within host cells (latency).

Explanation: Herpesviruses establish persistent infections by entering a latent state, where they remain dormant within host cells for extended periods.

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What are 'cytopathic effects'?

Answer: Structural and biochemical changes induced by viruses in host cells.

Explanation: Cytopathic effects are the observable structural and functional alterations that viruses cause in infected host cells.

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What are the primary mechanisms by which viruses cause disease?

Answer: By damaging/killing host cells, triggering harmful immune responses, or leading to chronic conditions like cancer.

Explanation: Viral pathogenesis involves multiple mechanisms, including direct cellular damage, induction of detrimental immune responses, and long-term effects like oncogenesis.

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Host-Virus Interactions and Defense

The human body's primary defense against viruses relies exclusively on the adaptive immune system.

Answer: False

Explanation: The human body employs both innate and adaptive immune systems to defend against viral infections.

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RNA interference (RNAi) functions as a mechanism whereby small RNA molecules facilitate the degradation of viral RNA, thereby preventing replication.

Answer: True

Explanation: RNA interference is a cellular process that targets and degrades viral RNA, serving as a defense against viral replication.

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Interferon is a viral protein that facilitates viral replication within host cells.

Answer: False

Explanation: Interferon is a host-derived protein that signals antiviral defenses to nearby cells; it is not a viral protein that aids replication.

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Which component of the human immune system provides a general, non-specific response to viral infections?

Answer: The innate immune system

Explanation: The innate immune system provides the body's first line of defense with general, non-specific responses to pathogens, including viruses.

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What is the function of RNA interference (RNAi) in the context of viral defense?

Answer: To degrade viral RNA and prevent replication.

Explanation: RNA interference (RNAi) is a cellular mechanism that targets and degrades viral RNA, thereby inhibiting viral replication.

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What role does interferon play in the host's defense against viruses?

Answer: It signals nearby cells to enhance their antiviral defenses.

Explanation: Interferons are signaling molecules that alert neighboring cells to prepare antiviral defenses, helping to limit viral spread.

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Applications and Ecological Roles

Vaccines confer immunity through the direct elimination of viruses present within the body.

Answer: False

Explanation: Vaccines stimulate the immune system to recognize and fight viruses, thereby conferring immunity, rather than directly killing existing viruses.

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Nucleoside analogues are antiviral pharmaceuticals that inhibit viral replication by mimicking DNA/RNA precursors and inducing chain termination.

Answer: True

Explanation: Nucleoside analogues function by being incorporated into viral genetic material, halting replication due to their structural inability to support further chain elongation.

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Viruses exert a minor influence on nutrient cycling within aquatic ecosystems.

Answer: False

Explanation: Viruses play a critical and significant role in nutrient cycling in aquatic ecosystems, particularly through the viral shunt mechanism.

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Virotherapy employs genetically modified viruses for the selective destruction of neoplastic cells.

Answer: True

Explanation: Virotherapy utilizes oncolytic viruses, often genetically engineered, to target and eliminate cancer cells.

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Viruses are regarded as simple molecules and possess no utility in nanotechnology.

Answer: False

Explanation: Viruses are utilized in nanotechnology as natural nanoparticles or scaffolds due to their precise structure and potential for engineering.

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Synthetic viruses are generated through naturally occurring mutations within host cells.

Answer: False

Explanation: Synthetic viruses are created in laboratories by synthesizing viral genetic material from scratch, not through natural mutations.

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The 'viral shunt' denotes the process by which viruses release nutrients from lysed microbes into the surrounding environment.

Answer: True

Explanation: The viral shunt is a key ecological process where viral lysis of microbes releases nutrients, supporting primary production in aquatic ecosystems.

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Virovory is the process through which viruses infect host cells.

Answer: False

Explanation: Virovory refers to the consumption of viruses as a food source, not the process of viral infection.

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Reverse transcriptase is an enzyme utilized by viruses to convert their RNA genome into DNA for the purpose of replication.

Answer: True

Explanation: Reverse transcriptase is essential for retroviruses and other related viruses to synthesize DNA from an RNA template, a key step in their replication cycle.

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Phage therapy is a therapeutic modality employing viruses to counteract bacterial infections.

Answer: True

Explanation: Phage therapy utilizes bacteriophages (viruses that infect bacteria) as a treatment strategy against bacterial infections.

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Plant virus particles are utilized as scaffolds in nanotechnology owing to their structural attributes.

Answer: True

Explanation: The precise and robust structure of plant virus particles makes them suitable for use as natural scaffolds in nanotechnology applications.

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The 'viral shunt' mechanism principally entails the direct transfer of genes between bacteria.

Answer: False

Explanation: The viral shunt primarily involves the release of nutrients from lysed microbes, not direct gene transfer between bacteria.

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How do vaccines primarily confer immunity against viral infections?

Answer: By stimulating the immune system to recognize and fight the virus.

Explanation: Vaccines prepare the immune system by exposing it to viral antigens, enabling a faster and more effective response upon subsequent actual infection.

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What is the mechanism of action for nucleoside analogue antiviral drugs?

Answer: They mimic DNA/RNA building blocks, causing chain termination during replication.

Explanation: Nucleoside analogues are incorporated into the viral genome during replication, leading to premature termination of the DNA or RNA chain.

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What is the primary role of viruses in regulating microbial populations in aquatic ecosystems?

Answer: They control populations through infection and lysis.

Explanation: Viruses regulate microbial populations by infecting and lysing cells, a process critical for nutrient cycling and ecosystem dynamics.

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What is virotherapy, a medical application of viruses?

Answer: Using viruses as vectors for gene therapy, especially against cancer.

Explanation: Virotherapy leverages viruses, often genetically modified, to selectively target and destroy diseased cells, particularly cancer cells, or to deliver therapeutic genes.

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In materials science, viruses are utilized primarily as:

Answer: Natural nanoparticles or scaffolds.

Explanation: The precise structure and size of viruses make them valuable as natural nanoparticles or scaffolds in materials science and nanotechnology.

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What does the term 'synthetic virus' typically refer to in a scientific context?

Answer: A virus whose genetic material is synthesized from scratch in a laboratory.

Explanation: Synthetic viruses refer to those whose genetic material is artificially synthesized in a laboratory setting.

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Why are viruses a concern in the context of biological warfare?

Answer: They can cause devastating epidemics and potentially be weaponized.

Explanation: The potential for viruses to cause widespread epidemics and their amenability to weaponization make them a concern in biological warfare.

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The 'viral shunt' is significant in marine environments because it:

Answer: Releases essential nutrients and organic matter from lysed microbes.

Explanation: The viral shunt process releases dissolved organic matter and nutrients from lysed microbes, supporting primary production in aquatic ecosystems.

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What is virovory?

Answer: The consumption of viruses as a food source.

Explanation: Virovory describes the behavior of consuming viruses as a source of nutrition.

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What is the function of reverse transcriptase in viruses like HIV?

Answer: To convert the viral RNA genome into DNA.

Explanation: Reverse transcriptase is an enzyme that synthesizes DNA from an RNA template, a crucial step for retroviruses like HIV.

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Why is phage therapy gaining renewed interest?

Answer: It offers a potential alternative to antibiotics due to rising antibiotic resistance.

Explanation: The rise of antibiotic-resistant bacteria has spurred renewed interest in phage therapy as a potential alternative treatment.

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